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  "Package": "rENA",
  "Title": "Epistemic Network Analysis",
  "Type": "Package",
  "Author": "Cody L Marquart [aut, cre]\n(<https://orcid.org/0000-0002-3387-6792>), Zachari Swiecki\n[aut], Wesley Collier [aut], Brendan Eagan [aut], Roman\nWoodward [aut], David Williamson Shaffer [aut]",
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  "Maintainer": "Cody L Marquart <cody.marquart@wisc.edu>",
  "Version": "0.4.14",
  "Description": "ENA (Shaffer, D. W. (2017) Quantitative Ethnography. ISBN:\n0578191687) is a method used to identify meaningful and\nquantifiable patterns in discourse or reasoning. ENA moves\nbeyond the traditional frequency-based assessments by examining\nthe structure of the co-occurrence, or connections in coded\ndata. Moreover, compared to other methodological approaches,\nENA has the novelty of (1) modeling whole networks of\nconnections and (2) affording both quantitative and qualitative\ncomparisons between different network models.  Shaffer, D.W.,\nCollier, W., & Ruis, A.R. (2016).",
  "LazyData": "TRUE",
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  "License": "GPL-3 | file LICENSE",
  "URL": "https://gitlab.com/epistemic-analytics/qe-packages/rENA",
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    "add_group",
    "add_network",
    "add_nodes",
    "add_points",
    "add_trajectory",
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    "as.ena.co.occurrence",
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    "as.ena.matrix",
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    "as.qe.code",
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    "as.qe.horizon",
    "as.qe.metadata",
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    "center",
    "check_range",
    "clear",
    "codes",
    "connection.matrix",
    "define",
    "directed_node_positions",
    "directed_node_positions_with_ground_response_added",
    "ena",
    "ena_correlation",
    "ena_group_stats",
    "ena_mean_ci",
    "ena_outlier_ci",
    "ena_space_dist_corr",
    "ena.accumulate.data",
    "ena.ccd",
    "ena.ccd.window",
    "ena.conversations",
    "ena.correlations",
    "ena.export.html",
    "ena.gd.window",
    "ena.ground.diversity",
    "ena.group",
    "ena.make.set",
    "ena.plot",
    "ena.plot.group",
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    "ena.plot.movie",
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    "ena.plot.points",
    "ena.plot.trajectory",
    "ena.plotter",
    "ena.rotate.by.generalized",
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    "ena.rotate.by.hena.regression_2",
    "ena.rotate.by.mean",
    "ena.rotate.by.svd",
    "ena.rotation.h",
    "ena.svd",
    "ena.tune.window.size",
    "ena.writeup",
    "ENAdata",
    "enaInteractiveOutput",
    "ENAplot",
    "ENARotationSet",
    "ENAset",
    "find_binary_cols",
    "find_code_cols",
    "find_dimension_cols",
    "find_meta_cols",
    "fun_cohens.d",
    "fun_skip_sphere_norm",
    "fun_sphere_norm",
    "get_x1_main_effect",
    "gmr",
    "group",
    "horizon",
    "is.qe.code",
    "is.qe.data",
    "is.qe.horizon",
    "is.qe.metadata",
    "is.qe.unit",
    "means_rotate",
    "merge_columns_c",
    "metadata",
    "methods_report",
    "methods_report_stream",
    "model",
    "move_nodes_to_unit_circle",
    "move_nodes_to_unit_circle_with_equal_space",
    "namesToAdjacencyKey",
    "optimize",
    "project",
    "project_in",
    "reclassify",
    "remove_meta_data",
    "renderEnaInteractive",
    "rotate",
    "show",
    "skip_sphere_norm",
    "sphere_norm",
    "units",
    "vector_to_ut",
    "with_means",
    "with_trajectory"
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  "_datasets": [
    {
      "name": "RS.data",
      "title": "Coded Rescushell Chat Data",
      "object": "RS.data",
      "class": [
        "data.frame"
      ],
      "fields": [
        "UserName",
        "Condition",
        "CONFIDENCE.Pre",
        "CONFIDENCE.Post",
        "CONFIDENCE.Change",
        "C.Level.Pre",
        "NewC.Change",
        "C.Change",
        "Timestamp",
        "ActivityNumber",
        "GroupName",
        "GameHalf",
        "GameDay",
        "text",
        "Data",
        "Technical.Constraints",
        "Performance.Parameters",
        "Client.and.Consultant.Requests",
        "Design.Reasoning",
        "Collaboration"
      ],
      "rows": 3824,
      "table": true,
      "tojson": true
    }
  ],
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      "page": "times-.ena.matrix",
      "title": "Multiply ena.matrix objects Element-wise multiplication of dimension columns in an ena.matrix by another ena.matrix or numeric matrix. If e2 is an ena.matrix, it is converted to a standard matrix before multiplication. The multiplication is applied only to the dimension columns of e1, while other columns remain unchanged.",
      "topics": [
        "*.ena.matrix"
      ]
    },
    {
      "page": "cash-.ena.matrix",
      "title": "Extract from ena.matrix easily using metadata",
      "topics": [
        "$.ena.matrix"
      ]
    },
    {
      "page": "cash-.ena.metadata",
      "title": "Extract metadata easily",
      "topics": [
        "$.ena.metadata"
      ]
    },
    {
      "page": "cash-.ena.points",
      "title": "Extract points easily",
      "topics": [
        "$.ena.points"
      ]
    },
    {
      "page": "cash-.line.weights",
      "title": "Extract line.weignts easily",
      "topics": [
        "$.line.weights"
      ]
    },
    {
      "page": "accumulate",
      "title": "Accumulate Connection Counts for ENA",
      "topics": [
        "accumulate"
      ]
    },
    {
      "page": "add_group",
      "title": "Add a group mean to an ENA plot",
      "topics": [
        "add_group"
      ]
    },
    {
      "page": "add_network",
      "title": "Add a network to an ENA plot",
      "topics": [
        "add_network"
      ]
    },
    {
      "page": "add_nodes",
      "title": "Add nodes to an ENA plot",
      "topics": [
        "add_nodes"
      ]
    },
    {
      "page": "add_points",
      "title": "Add points to an ENA plot",
      "topics": [
        "add_points"
      ]
    },
    {
      "page": "add_trajectory",
      "title": "Add a trajectory to an ENA plot",
      "topics": [
        "add_trajectory"
      ]
    },
    {
      "page": "as_trajectory",
      "title": "Title",
      "topics": [
        "as_trajectory"
      ]
    },
    {
      "page": "as.ena.co.occurrence",
      "title": "Re-class vector as ena.co.occurrence",
      "topics": [
        "as.ena.co.occurrence"
      ]
    },
    {
      "page": "as.ena.dimension",
      "title": "Re-class vector as ena.dimension",
      "topics": [
        "as.ena.dimension"
      ]
    },
    {
      "page": "as.ena.matrix",
      "title": "Re-class matrix as ena.matrix",
      "topics": [
        "as.ena.matrix"
      ]
    },
    {
      "page": "as.ena.metadata",
      "title": "Re-class matrix as ena.metadata",
      "topics": [
        "as.ena.metadata"
      ]
    },
    {
      "page": "as.matrix.ena.connections",
      "title": "ENA Connections as a matrix",
      "topics": [
        "as.matrix.ena.connections"
      ]
    },
    {
      "page": "as.matrix.ena.line.weights",
      "title": "ENA line weights as matrix",
      "topics": [
        "as.matrix.ena.line.weights"
      ]
    },
    {
      "page": "as.matrix.ena.matrix",
      "title": "Matrix without metadata",
      "topics": [
        "as.matrix.ena.matrix"
      ]
    },
    {
      "page": "as.matrix.ena.nodes",
      "title": "ENA nodes as matrix",
      "topics": [
        "as.matrix.ena.nodes"
      ]
    },
    {
      "page": "as.matrix.ena.points",
      "title": "ENA points as matrix",
      "topics": [
        "as.matrix.ena.points"
      ]
    },
    {
      "page": "as.matrix.ena.rotation.matrix",
      "title": "ENA rotations as matrix",
      "topics": [
        "as.matrix.ena.rotation.matrix"
      ]
    },
    {
      "page": "as.matrix.row.connections",
      "title": "ENA row connections as matrix",
      "topics": [
        "as.matrix.row.connections"
      ]
    },
    {
      "page": "as.qe.code",
      "title": "Convert a vector to 'qe.code' class",
      "topics": [
        "as.qe.code"
      ]
    },
    {
      "page": "as.qe.data",
      "title": "Convert an object to 'qe.data' class",
      "topics": [
        "as.qe.data"
      ]
    },
    {
      "page": "as.qe.horizon",
      "title": "Convert a vector to 'qe.horizon' class",
      "topics": [
        "as.qe.horizon"
      ]
    },
    {
      "page": "as.qe.metadata",
      "title": "Convert a vector to 'qe.metadata' class",
      "topics": [
        "as.qe.metadata"
      ]
    },
    {
      "page": "as.qe.unit",
      "title": "Convert a vector to 'qe.unit' class",
      "topics": [
        "as.qe.unit"
      ]
    },
    {
      "page": "center",
      "title": "Center ENA Data",
      "topics": [
        "center"
      ]
    },
    {
      "page": "check_range",
      "title": "Updates the axis ranges of an ENA plot based on the plotted data.",
      "topics": [
        "check_range"
      ]
    },
    {
      "page": "clear",
      "title": "Clears specified plots from an ENA set.",
      "topics": [
        "clear"
      ]
    },
    {
      "page": "codes",
      "title": "Reclassify specified columns as codes or list codes columns in a data.table",
      "topics": [
        "codes"
      ]
    },
    {
      "page": "compute_SB",
      "title": "Compute Between-Group Scatter Matrix",
      "topics": [
        "compute_SB"
      ]
    },
    {
      "page": "connection.matrix",
      "title": "Connection counts as square matrix",
      "topics": [
        "connection.matrix"
      ]
    },
    {
      "page": "define",
      "title": "Apply metadata and code transformations to a data.table",
      "topics": [
        "define"
      ]
    },
    {
      "page": "directed_node_positions",
      "title": "Directed ENA node positions",
      "topics": [
        "directed_node_positions"
      ]
    },
    {
      "page": "directed_node_positions_with_ground_response_added",
      "title": "Directed node positions with ground+response combined",
      "topics": [
        "directed_node_positions_with_ground_response_added"
      ]
    },
    {
      "page": "ena",
      "title": "Wrapper to generate, and optionally plot, an ENA model",
      "topics": [
        "ena"
      ]
    },
    {
      "page": "ena_correlation",
      "title": "Calculate ENA correlations",
      "topics": [
        "ena_correlation"
      ]
    },
    {
      "page": "ena_group_stats",
      "title": "Two-group comparison statistics for ENA points",
      "topics": [
        "ena_group_stats"
      ]
    },
    {
      "page": "ena_mean_ci",
      "title": "Confidence intervals around group mean positions",
      "topics": [
        "ena_mean_ci"
      ]
    },
    {
      "page": "ena_outlier_ci",
      "title": "Outlier (Tukey-fence) intervals for group positions",
      "topics": [
        "ena_outlier_ci"
      ]
    },
    {
      "page": "ena_space_dist_corr",
      "title": "Correlation between distances in two ENA spaces",
      "topics": [
        "ena_space_dist_corr"
      ]
    },
    {
      "page": "ena.accumulate.data",
      "title": "Accumulate data from a data frame into a set of adjacency (co-occurrence) vectors",
      "topics": [
        "ena.accumulate.data"
      ]
    },
    {
      "page": "ena.ccd",
      "title": "Compute Cross-Covariance Decay Curves and Noise Floor",
      "topics": [
        "ena.ccd"
      ]
    },
    {
      "page": "ena.ccd.window",
      "title": "Calculate ENA Moving Window Size via Cross-Covariance Decay (CCD)",
      "topics": [
        "ena.ccd.window"
      ]
    },
    {
      "page": "ena.conversations",
      "title": "Find conversations by unit",
      "topics": [
        "ena.conversations"
      ]
    },
    {
      "page": "ena.correlations",
      "title": "Calculate the correlations",
      "topics": [
        "ena.correlations"
      ]
    },
    {
      "page": "ena.export.html",
      "title": "Export a self-contained interactive ENA plot as HTML",
      "topics": [
        "ena.export.html"
      ]
    },
    {
      "page": "ena.gd.window",
      "title": "Calculate the Peak Ground Diversity Window",
      "topics": [
        "ena.gd.window"
      ]
    },
    {
      "page": "ena.ground.diversity",
      "title": "Calculate Ground Diversity (Entropy) Curves and Peaks",
      "topics": [
        "ena.ground.diversity"
      ]
    },
    {
      "page": "ena.group",
      "title": "Compute summary statistic for groupings of units using given method (typically, mean)",
      "topics": [
        "ena.group"
      ]
    },
    {
      "page": "ena.make.set",
      "title": "Generate ENA Set",
      "topics": [
        "ena.make.set"
      ]
    },
    {
      "page": "ena.plot",
      "title": "Generate a plot of an ENAset",
      "topics": [
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      ]
    },
    {
      "page": "ena.plot.group",
      "title": "Plot of ENA set groups",
      "topics": [
        "ena.plot.group"
      ]
    },
    {
      "page": "ena.plot.interactive",
      "title": "Interactive ENA plot using qeviz",
      "topics": [
        "ena.plot.interactive"
      ]
    },
    {
      "page": "ena.plot.movie",
      "title": "Animated movie of growing ENA trajectories",
      "topics": [
        "ena.plot.movie"
      ]
    },
    {
      "page": "ena.plot.network",
      "title": "Plot an ENA network",
      "topics": [
        "ena.plot.network"
      ]
    },
    {
      "page": "ena.plot.points",
      "title": "Plot points on an ENAplot",
      "topics": [
        "ena.plot.points"
      ]
    },
    {
      "page": "ena.plot.trajectory",
      "title": "Plot of ENA trajectories",
      "topics": [
        "ena.plot.trajectory"
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    },
    {
      "page": "ena.plotter",
      "title": "Wrapper to generate plots of units, groups, and networks",
      "topics": [
        "ena.plotter"
      ]
    },
    {
      "page": "ena.rotate.by.generalized",
      "title": "ENA Rotate by generalized means rotation (GMR)",
      "topics": [
        "ena.rotate.by.generalized"
      ]
    },
    {
      "page": "ena.rotate.by.hena.regression",
      "title": "ENA Rotate by regression",
      "topics": [
        "ena.rotate.by.hena.regression"
      ]
    },
    {
      "page": "ena.rotate.by.hena.regression_2",
      "title": "ENA Rotate by regression (second way)",
      "topics": [
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      ]
    },
    {
      "page": "ena.rotate.by.mean",
      "title": "ENA Rotate by mean",
      "topics": [
        "ena.rotate.by.mean"
      ]
    },
    {
      "page": "ena.rotate.by.svd",
      "title": "ENA Rotate by SVD (Principal Components)",
      "topics": [
        "ena.rotate.by.svd"
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    },
    {
      "page": "ena.rotation.h",
      "title": "hENA rotation for ENA",
      "topics": [
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      "page": "ena.set.creator",
      "title": "Wrapper to generate an ENA model",
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      "page": "ena.svd",
      "title": "ENA SVD",
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      "page": "ena.tune.window.size",
      "title": "Tune Window Size for ENA Accumulation",
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      "page": "ena.writeup",
      "title": "Calculate the correlations",
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      "page": "ENAdata",
      "title": "ENAdata R6class",
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      "page": "enaInteractiveOutput",
      "title": "Shiny output binding for interactive ENA plots",
      "topics": [
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      "page": "ENAplot",
      "title": "ENAplot Class",
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    {
      "page": "ENARotationSet",
      "title": "ENARotationSet R6class",
      "topics": [
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    {
      "page": "ENAset",
      "title": "ENAset R6class",
      "topics": [
        "ENAset"
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    },
    {
      "page": "find_binary_cols",
      "title": "Find Binary Columns",
      "topics": [
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    },
    {
      "page": "find_code_cols",
      "title": "Find code columns",
      "topics": [
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      "page": "find_dimension_cols",
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      "page": "find_meta_cols",
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      "page": "fun_cohens.d",
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      "page": "fun_skip_sphere_norm",
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    {
      "page": "get_x1_main_effect",
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      "page": "group",
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      "page": "horizon",
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      "page": "means_rotate",
      "title": "Title",
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      "page": "merge_columns_c",
      "title": "Merge data frame columns",
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      "page": "metadata",
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      "page": "methods_report",
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      "page": "methods_report_stream",
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      "page": "model",
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      "topics": [
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      "page": "move_nodes_to_unit_circle",
      "title": "Title",
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      "page": "namesToAdjacencyKey",
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      "page": "optimize",
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      "page": "plot.ena.ccd",
      "title": "Plot Cross-Covariance Decay Curve",
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      "title": "Title",
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      "page": "rENA",
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      "page": "rotate",
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      "page": "RS.data",
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      "page": "scale.ENAplot",
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      "topics": [
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      "page": "show",
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      "page": "skip_sphere_norm",
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      "page": "sphere_norm",
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      "page": "with_means",
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